Our engineering team specializes in developing a fast and accurate FPGA-accelerated platform called DRAGEN, for the secondary analysis of Next Generation Sequencing (NGS) data.
The platform supports a wide range of pipelines, including whole genome and targeted (enriched/amplicon) analysis for germline and somatic (tumor/normal and tumor-only) samples, DNA/RNA, small variants, CNV and structural variants. These software/hardware solutions provide complete results in world record time with high reliability. That's why researchers and clinicians worldwide rely on DRAGEN for a wide variety of applications, including rare and undiagnosed inherited diseases, population-scale genetics, infectious disease, and cancer in settings ranging from early access R&D to research applications to IVD certified clinical settings.
Our team does the core engineering to support all of these features and algorithms, thus enabling the broader team that designs novel analysis methods and algorithms for variant discovery and FPGA implementation. Our fast and accurate implementations enable new life-saving applications of genetics, and can actually save lives.
We are searching for software engineers who are ready to join us in this important mission. Are you ready to work on a big, important production codebase and lay down some fast C++? If so, we'd love to see your application.
This role can be performed at the San Diego, CA headquarters (ideal), or for the right candidate may be remote in the United States.
Responsibilities:
Develop optimized multi-threaded C++ software on Linux for data intensive applications.
Design solutions for complex software engineering problems.
Work closely with bioinformatics team, FPGA design team, test and QA teams.
Build expert knowledge on software development techniques.
Provide technical leadership where desired.
Requirements:
Degree in Computer Science/Engineering/Bioinformatics/Mathematics or related field
Extensive knowledge and experience with C++, multi-threading, and memory management techniques.
Proficient with tools for Linux software debugging and troubleshooting (GDB, Sanitzers, etc.)
Proficient with git.
Extensive experience writing high quality unit tests against mock objects.
Good understanding of object-oriented analysis and design.
Demonstrated success in collaborating in a fast-paced agile environment.
Experience/Education:
Typically requires a minimum of 5 years of related experience with a Bachelor’s degree; or 3 years and a Master’s degree; or a PhD without experience; or equivalent work experience.
Desired:
Knowledge and experience in developing software to interface with custom hardware
Experience with tools for software performance analysis and optimization (perf, etc.) is a plus.
Experience with Linux APIs, including familiarity with system calls, library functions, and kernel interfaces.
Be curious, detail oriented, and analytical, with a proven ability to learn quickly
Be customer-focused, team-oriented, and motivated, taking ownership of assigned tasks
Have proven ability to self-manage, as well as manage interdisciplinary relationships
Have proven verbal and written communication skills
Listed responsibilities are an essential, but not exhaustive, list of the usual duties associated with the position. Changes to individual responsibilities may occur due to business needs.
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The estimated base salary range for the Senior Software Engineer role based in the United States of America is: $126,800 - $190,200. Should the level or location of the role change during the hiring process, the applicable base pay range may be updated accordingly. Compensation decisions are dependent on several factors including, but not limited to, an individual’s qualifications, location where the role is to be performed, internal equity, and alignment with market data. Additionally, all employees are eligible for one of our variable cash programs (bonus or commission) and eligible roles may receive equity as part of the compensation package. We offer a wide range of benefits as innovative as our work, including access to genomics sequencing, family planning, health/dental/vision, retirement benefits, and paid time off.At Illumina, we strive to foster a diverse and inclusive workplace by cultivating an environment in which everyone contributes to our mission. Built on a strong foundation, Illumina has always been rooted in openness, collaboration, and seeking alternative views and perspectives to propel innovation in genomics. We are proud to confirm a zero-net gap in pay, regardless of gender, ethnicity, or race. We also have several Employee Resource Groups (ERG) that deliver career development experiences, increase cultural awareness, and demonstrate our collective commitment to diversity and inclusion in the communities we live and work. We are proud to be an equal opportunity employer committed to providing employment opportunity regardless of sex, race, creed, color, gender, religion, marital status, domestic partner status, age, national origin or ancestry, physical or mental disability, medical condition, sexual orientation, pregnancy, military or veteran status, citizenship status, and genetic information. If you require accommodation to complete the application or interview process, please contact accommodations@illumina.com. To learn more, visit: https://www.dol.gov/ofccp/regs/compliance/posters/pdf/eeopost.pdf
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